Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900127.1_cds_XP_016450151.1_44631
CDS Infomation

[gene=LOC107775004] [db_xref=GeneID:107775004] [protein=light-inducible protein CPRF2-like] [protein_id=XP_016450151.1] [location=complement(join(14363..14761,15612..15737,15814..15889,17409..17619,19920..20019,20153..20593))] [gbkey=CDS]
Sequence

ATGGATAGGGTGTTTTCAGTGGACGATGACATTGGCGACCACTTCTGGTCGACGCCGCCG
ACGGCGGACTTAGGCGTTGATTCACCAACCACTGCCACCGCCGCCTCCTACTCAAAGATG
ATGAATCGCAGCTCTTCCGAGTGGGCTTTTCAGCGCTTCCTCCAAGAAGCCACCGCCGCC
GGTACCTCCACTTCATCTCACCCTCAGCCACCTACAATGACGGCGTCTTCATCTTCATCT
TCGCACCAAAACGATGTCGTGGAGATCAAGGATGAGAATCTTTCTACTCCTAATTTAAAT
CCCAGTACGGCGTTGAACTCGAAGCCGGCGTCGTCGTTTGGCCTCACACCTCCACCGAAT
ATTGCCGTTGATTCTGAAGAGTATCAAGCATTCCTCAAAAGCCAACTCCATTTGGCTTGC
GCCGCCGTTGCTTTGACTCGCGGCAAGAGTTTAAACCCTCAGGATTCAGGTTCTACAGCT
CATGACAAAGGATCAGAGACTGCTAGTGCAGCTCAATCAGGATCGCACGTCTCCACTTTA
GGATCTAGTCAGGAAATGGCAAAAATTCAAGATAAGGATGCTGGTGGGCCAGTTGGAATT
CCCTCCTTGCCCCCGGTGCAAAAGAAACCTGTGGTGCAGGTGAGGTCAACAACCAGTGGT
TCATCTAGAGAGCAATCTGATGATGATGAAGCTGAAGGAGAAGCAGAAACAACTCAAGGC
ATGGATCCAGCTGATGCAAAACGTGTAAGGAGAATGCTTTCAAATAGAGAATCAGCCAGA
CGTTCAAGGAGAAGAAAGCAGGCCCATCTGACAGAACTAGAGACACAGGTTTCTCAACTC
AGAGTAGAAAACTCCTCTCTACTGAAACGTCTGACTGACATAAGCCAGAAATACAATGAA
GCAGCGGTTGATAATCGAGTCTTGAAAGCAGATGTTGAGACATTAAGAGCGAAGGTGAAG
ATGGCTGAAGAAACTGTTAAAAGAGTTACTGGGTTAAATCCGTTATTCCAAGCTATGTCA
GAGATTTCCTCAATGGTAATGCCATCCTACTCTGGTAGTCCTTCCGACACATCAGCAGAT
GCTGCTGTACCTGTGCAAGATGATCCGAAGCATCACTACTACCAACAACCGCCAAATAAT
CATATGCCAACCAATGATCCTAGAATCCAAAATGGTATGGTGGATGTTCCTCCAATAGAA
AATGTACAGCAGAATCCTGCAACAGCAGCAGTTGGGGGGAACAAGATGGGTAGAACAGCT
TCAATGCAGCGGGTTGCTAGCTTGGAACATCTGCAGAAGCGCATCCGTGGTGAAATCAGT
TCCTGTGGAACTCAAGGCCGTGGAGAGCAATAA

Peptide Sequence

PEP ID

XP_016450151.1
PEP Infomation

PREDICTED: light-inducible protein CPRF2-like [Nicotiana tabacum]
Sequence

MDRVFSVDDDIGDHFWSTPPTADLGVDSPTTATAASYSKMMNRSSSEWAFQRFLQEATAA
GTSTSSHPQPPTMTASSSSSSHQNDVVEIKDENLSTPNLNPSTALNSKPASSFGLTPPPN
IAVDSEEYQAFLKSQLHLACAAVALTRGKSLNPQDSGSTAHDKGSETASAAQSGSHVSTL
GSSQEMAKIQDKDAGGPVGIPSLPPVQKKPVVQVRSTTSGSSREQSDDDEAEGEAETTQG
MDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDISQKYNE
AAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPLFQAMSEISSMVMPSYSGSPSDTSAD
AAVPVQDDPKHHYYQQPPNNHMPTNDPRIQNGMVDVPPIENVQQNPATAAVGGNKMGRTA
SMQRVASLEHLQKRIRGEISSCGTQGRGEQ

Transcript Sequence

Gene sequence data has not been registered.